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如何阅读文献在肿瘤学方面有哪些好的杂志如何快速阅读文献以获取知识论文的主要结构肿瘤的分子信号转导+genomicinstabilityfromHanahanandWeinberg2000SignalTransductionandCancerLectureI:GrowthFactorsandReceptorsOutline:WhatisSignalTransduction? WhatareGrowthFactors?HowdotheycontributetonormalST?HowisthisSTderegulatedinCancer?LectureI:GrowthFactorsandReceptorsWhatisSignalTransduction?SignalTransductionistheprocessbywhichacellconvertsanextracellularsignalintoaresponse.Involvedin:Cell-cellcommunicationCell’sresponsetoenvironmentIntracellularhomeostatsis-internalcommunicationGenericSignallingPathwaySignalReceptor(sensor)TransductionCascadeTargetsResponseAlteredMetabolismMetabolicEnzymeGeneRegulatorCytoskeletalProteinAlteredGeneExpressionAlteredCellShapeorMotilityAdaptedfromMolecularBiologyoftheCell,(2002),4thedition,Albertsetal.ComponentsofSignallingWhatcanbetheSignal?ExternalmessagetothecellPeptides/Proteins-GrowthFactorsAminoacidderivatives-epinephrine,histamineOthersmallbiomolecules-ATPSteroids,prostaglandinsGases-NitricOxide(NO)PhotonsDamagedDNAOdorants,tastantsSignal=LIGANDLigand-Amoleculethatbindstoaspecificsiteonanothermolecule,usuallyaprotein,iereceptorComponentsofSignallingWhatareReceptors?Sensors,whatthesignal/ligandbindstoinitiateSTCellsurface
Intracellular
HydrophillicLigandCell-SurfaceReceptorPlasmamembraneHydrophobicLigandCarrierProteinIntracellularReceptorNucleusAdaptedfromMolecularBiologyoftheCell,(2002),4thedition,Albertsetal.Ligand-gatedionchannelCellSurfaceReceptorTypes:CellSurfaceReceptorTypes:G-ProteinCoupledReceptorCellSurfaceReceptorTypes:egGrowthFactorReceptorsEnzyme-linkedReceptorGrowthFactorsLigandswhichbindenzymelinkedreceptorsSignaldiversecellularresponsesincluding:ProliferationDifferentiationGrowthSurvivalAngiogenesisCansignaltomultiplecelltypesorbespecificFactorPrincipalSourcePrimaryActivityCommentsPDGFplatelets,endothelialcells,placentapromotesproliferationofconnectivetissue,glialandsmoothmusclecellstwodifferentproteinchainsform3distinctdimerforms;AA,ABandBBEGFsubmaxillarygland,Brunnersglandpromotesproliferationofmesenchymal,glialandepithelialcells
TGF-
commonintransformedcellsmaybeimportantfornormalwoundhealingrelatedtoEGFFGFwiderangeofcells;proteinisassociatedwiththeECMpromotesproliferationofmanycells;inhibitssomestemcells;inducesmesodermtoforminearlyembryosatleast19familymembers,4distinctreceptorsNGF
promotesneuriteoutgrowthandneuralcellsurvivalseveralrelatedproteinsfirstidentifiedasproto-oncogenes;trkA(trackA),trkB,trkCErythropoietinkidneypromotesproliferationanddifferentiationoferythrocytes
TGF-
activatedTH1cells(T-helper)andnaturalkiller(NK)cellsanti-inflammatory(suppressescytokineproductionandclassIIMHCexpression),promoteswoundhealing,inhibitsmacrophageandlymphocyteproliferationatleast100differentfamilymembersIGF-IprimarilyliverpromotesproliferationofmanycelltypesrelatedtoIGF-IIandproinsulin,alsocalledSomatomedinCIGF-IIvarietyofcellspromotesproliferationofmanycelltypesprimarilyoffetaloriginrelatedtoIGF-IandproinsulinGrowthFactorReceptorsMostgrowthfactorsbindReceptorTyrosineKinasesGrowthFactorReceptorActivationIRTKRS/TKGrowthFactorReceptorActivationIIGrowthsignalautonomy,Insensitivitytoanti-growthsignals,Resistancetoapoptosis:Uncouplecell’sgrowthprogramfromsignalsintheenvironment.Growthfactorsinnormalcellsserveasenvironmentalsignals.GrowthFactorSTandCancerGrowthfactorsregulategrowth,proliferation,andsurvival.Theseareallderegulatedincancer.HanahanandWeinberg,(2000)HallmarksofCancer,Cell(100)57GrowthfactorswithOncogenicPotentialPDGF,originallyshowntoregulateproliferation,wasalsoshowntohavehomologytov-sis,thesimiansarcomavirus.OtherviraloncogenesencodedproteinproductsthatweregrowthfactorsthatoftenoverexpressedincancersuchasTGF-a.Autocrinesignallingleadstoderegulatedgrowth.
PDGFfamily Neurotrophins
Achain NGF Bchain(c-sis) BDNFFGFFamily NT3
acidicFGF Cytokines(Hematopoietic) basicFGF IL-2EGFFamily IL-3
EGF M-CSF TGF-a GM-CSF
GFReceptorswithOncogenicPotentialEGFR,kinaseactivitystimulatedbyEGF-1andTGF-ainvolvedincellgrowthanddifferentiation,waslinkedviasequencehomologytoaknownavianerythroblastosisvirusonocgene,v-erbB.Sincethen,manyoncogeneshavebeenshowntoencodeforGFRs.EGFRfamily InsulinReceptorfamily
erbB1(c-erbB) IGF-1(c-ros) erbB2(neu) Neurotrophins
FGFFamily NGFR(trk)
FGFR-1(fig) BDNFR(trk-B) FGFR-2(K-sam) NT3R(trk-C)PDGFRFamily
CSF-1R(c-fms) SLFR(c-kit) InductionofcancerbyalternationsinseveraltypesofproteinsinvolvedincellgrowthcontrolSignalTransductionandCancerLectureII:IntracellularSignallingOutline:Whataresomesignallingpathways? Whataretheircellbiologicaloutputs?Howdotheseresultinthecancerphenotype?Howcanweexploitsignallingpathwaysfortherapy?GenericSignalTransductionRTKSignalTransductionSignalTransductionDownstreameffectorsProteinSignalingModules(Domains)SH2andPTBbindtotyrosinephosphorylatedsitesSH3andWWbindtoproline-richsequencesPDZdomainsbindtohydrophobicresiduesattheC-terminioftargetproteinsPHdomainsbindtodifferentphosphoinositidesFYVEdomainsspecificallybindtoPdtlns(3)P(phosphatidylinositol3-phosphate)MechanismsforActivationofSignalingProteinsbyRTKsActivationbymembranetranslocationActivationbyaconformationalchangeActivationbytyrosinephosphorylationMechanismsforAttenuation&TerminationofRTKActivationLigandantagonistsReceptorantagonistsPhosphorylationanddephosphorylationReceptorendocytosisReceptordegradationbytheubiquitin-proteosomepathwayActivationofMAPKPathwaysbyMultipleSignalsGrowth,differentiation,inflammation,apoptosis->tumorigenesisOverviewofMAPKSignalingPathwaysTheMAPKPathwayActivatedbyRTKRTKST-PI3KpathwayPProto-oncogenesthatEncodeforSignallingProteinsSerine/ThreonineKinasesc-raffamilyaktNon-receptorTyrosineKinasessrcablReceptorassociatedbindingproteinsc-rasfamilyRasrecruitsRaftothemembraneSTintermediatescanbetargetsforanti-cancerdrugsKinases:RafSTintermediatescanbetargetsforanti-cancerdrugsKinases:Bcr-AblCellPatterningCellGrowthBMPWnt01FGFHedgehog02WhataretheessentialelementsofanySignalingcascade?Signal–ligand添加标题DiffusibleorTethered添加标题Receptor添加标题Transmembrane(exceptforlipidsolubleligands)添加标题Transducers-effectors添加标题Targets添加标题GenesorCellularcomponents添加标题WntSignalingPathwayWntsSignalFrizzledsReceptorb-cateninTransducers-effectorsGenescytoskeletonTargetsTheSignal:Wnt1•morphogen-diff.Concentrationsofligandelicitdifferent2responsesinequivalentcells3•morphogenicmovementsandcellfatedeterminants4•“Beposterior”-cellfate5•“divide”-proliferation6•developmentalabnormalitieswhengenedeletedWingless(Wg):DrosophilaSharmadescribesawinglessmutationin1973√Sharma,1973Wingless-anewmutantinD.melanogaster.D.I.S.50:134√SharmaandChopra,1976,Effectofthewingless(wg1)mutationonwingandhalteredevelopmentinDrosophilamelanogaster.Dev.Biol.48:461-465LateritwasclonedpositionallyIntegrationofMMTVcausesmammarytumorsinmiceTumorsarepregnancydependentMMTVhasasteroidenhancerMicedevelopbreasttumorsbutonlyduringlactationGenewasdesignated-Int-1(integrationofMMTV)OtherinsertionsitesoccurredatotherGFse.g.FGFTumorsexhibitdominantGainofFunctionLesson:Ectopicactivationofagene>hyperplasia=OncogeneWingless+int-1=WntFlywgandMouseInt-1arehomologsGenesarecloned.Sequenceissimilar
102030405060708090100HWnt-1MGLWALLPSWVSTTLLLALTALPAALAANS----SGR-----WWGIVNIASSTNLLTDSKSLQLVLEPSLQLLSR-KQRRLIRQNPGILHSVSGGLQSAVFlyWgMDISYIFVICLMALCSGGSSLSQVEGKQKSGRGRGSMWWGIAKVGEPNNITP-----IMYMDPAIHSTLRRKQRRLVRDNPGVLGALVKGANLAI110120130140150160170180190200HWnt-1RECKWQFRNRRWNCPT---APGPHLFGKIVNRGCRETAFIFAITSAGVTHSVARSCSEGSIESCTCDYRR--RGP----------GGPDWHWGGCSDNIDFlyWgSECQHQFRNRRWNCSTRNFSRGKNLFGKIVDRGCRETSFIYAITSAAVTHSIARACSEGTIESCTCDYSHQSRSPQANHQAGSVAGVRDWEWGGCSDNIG210220230240250260270280290300HWnt-1FGRLFGREFVDSGEKGRDLRFLMNLHNNEAGRTTVFSEMRQECKCHGMSGSCTVRTCWMRLPTLRAVGDVLRDRFDGASRVLYGN---------------FlyWgFGFKFSREFVDTGERGRNLREKMNLHNNEAGRAHVQAEMRQECKCHGMSGSCTVKTCWMRLANFRVIGDNLKARFDGATRVQVTNSLRATNALAPVSPNA310320330340350360370380390400HWnt-1RGSN----------------------------------------------------------RASR----------AELLRLEPEDPAHKPPSPHDLVYFFlyWgAGSNSVGSNGLIIPQSGLVYGEEEERMLNDHMPDILLENSHPISKIHHPNMPSPNSLPQAGQRGGRNGRRQGRKHNRYHFQLNPHNPEHKPPGSKDLVYL410420430440450460470HWnt-1EKSPNFCTYSGRLGTAGTAGRACNSSSPALDGCELLCCGRGHRTRTQRVTERCNCTFHWCCHVSCRNCTHTRVLHECLNFlyWgEPSPSFCEKNLRQGILGTHGRQCNETSLGVDGCGLMCCGRGYRRDEVVVVERCACTFHWCCEVKCKLCRTKKVIYTCLNTheSignal:Wnt•Secretedproteinligandsof80-100aa•Lipidmodified
Latestbreakthrough(2003):purificationofactiveWnt requiresorganicextraction!!•Shortrangeacting•Sticktoextracellularmatrix•Gradients---->morphogenic?•multipleWnts(19inhuman/mouseand7inDrosophila)Wntssignalthroughserpentinereceptors2classesofsignalingreceptorsCatalyticTyrosineKinaseReceptors[RTKs]Ser/ThrKinaseReceptors[BMPs]Serpentine/G-protein-coupled-receptors(GPCRs)/7-transmembraneWntsßadrenergic,dopamine,epinepherineetcTheReceptor:Frizzled•corereceptorforWnts•seven-passtransmembraneproteins•probablyG-proteincoupledreceptors•multipleFrizzleds(10inhuman/mouseand4inDrosophila)•anewlyidentifiedco-receptorforWnts•singlepasstransmembraneprotein•relatedtofamilyoflipoproteinreceptorsLRP/arrow:WntSignalingregulatesgeneexpressionandcellpolaritycanonicalWntFzWntFzLrpLrpnon-canonical/~rnusse/pathways/cell2/CanonicalWntsignalingin2005b-cateninisthecytoplasmic-nuclearsignalingmediatorb-catenin章节一b-catenin•armadilloinDrosophila
geneticsdeterminedthatitfunctioneddownstreamofWg•b-catenininmammaliansystemidentifiedascomponent ofcelladhesionjunctions•subcellularlocalizationofproteincontroversialforyears•purificationofb-cateninandcloningofgenein1991byP.McCraeandB.Gumbinershowedthatarmadilloandb-cateninareorthologuesThetransducer/effector:Armadillorepeatstructureofb-cateninLEF/TCFWntCK1GSK-3bAPCb-cateninaxinFrizzledLRPE-cadherinWntsignalingpathwayLiuetal.2002.Cell108:837.Complicatedphosphorylationcontrolsb-cateninstabilityHowdoesb-cateninreachtargetgenes?•LEF/TCFtranscriptionfactors•HMG(HighMobilityGroup)proteins•mammalianLEF-1andTCF-1identifiedinTlymphocytes in1991•twomoremembersclonedbylowstringencyscreeningofLibrariesanddegeneratePCRin1993•b-cateninwasusedinayeasttwo-hybridassayandLEF-1wasclonedasaninteractingproteinin1997 -endpointofthepathwaydetermined -mergedtwoindependentgroupsofscientists -subcellularlocalizationofb-cateninfinallysettledGeneralStructureofLEF/TCFTranscriptionFactorsb-cateninbindingCo-repressorbindingDNAbinding/bendingalt.COOHTCF-1TCF-3TCF-4NLSHMGNLEF-1BBBEEE94%96%99%55%52%64%TargetGenesofWntSignaling•cellcycleregulatorsandtranscriptionfactors -c-MYC -cyclinD1•tissuespecificgenes•tissueremodelingproteins -matrixmetalloproteinases -ephrinreceptorsandligands -adhesionproteins•angiogenesis -VEGFIntheabsenceofWntsignaling:NLSHMGNLEF-1BNLSHMGNdnLEF-1BGrouchoLEF/TCFWntGSK-3baxinFrizzledLRPAPCLEF/TCFLEF/TCFLEF/TCFLEF/TCFLEF/TCFLEF/TCFLEF/TCFLEF/TCFActivationofLEF-1targetgenescantransformcellsAoki,M.etal.1999.Proc.Natl.Acad.Sci.USA.96:139-144anchorage-independentgrowthcontactinhibitioncolonyformation/~rnusse/wntwindow.htm•IdentifiedbyJoannaGrodenandRayWhiteasatumorsuppressorgenesufferingLOHinfamilieswithveryhighratesofcoloncancer.•TruncationmutationsorlossoftheentiregeneoccursinmostAdenomatousPolyposisColi01•Sporadiccoloncancers02Hereditarycolorectalcancer(~15%)FamilialAdenomatousPolyposis(FAP)-<1%allcolorectalCAGermlinemutationsinAPCgene.Acceleratedtumourinitiation.RatelimitingstepissomaticmutationinotherAPCalleleMedianageofcancerdiagnosis42yrs.Despitesharedgenotypes,notallclinicaldiseaseissimilar(diseasemodifyinggenesorenvironmentalinfluences?)Oftendevelopextracolonicmanifestations.MousemodelAPCminHereditaryNonPolyposisColorectalCancer(HNPCC)-2-4%allcolorectalCAMutationsinDNAmismatchrepair(MMR)genes-germline-genome-wide microsatelliteinstability(MI).Earlycluescamefrombacterialstudies.Adenomasformatthesamerateasthegeneralpopulation,butthereisacceleratedtumourprogressionMedianageofcancerdiagnosisalso42yrs.FAP HNPCC Sporadic Sporadic Adenomas CancersIncidence1:7000 1:500 1in2 1in20APCmutation>90% >80% >80%(prevalance) (germline) (somatic) (somatic)MMRdeficiency >90% <3% 13%(prevalance)MMRgene >70% ? ~65%mutationsAPCshuttlemode-speculativelWntsignalingandcolorectalcancerMajorfunctionofAPCistheregulationofcelluarb-cateninlevels.ActivationofwntpathwayincoloncancerdrivescellproliferationTcf-responsivegenes:c-myc,cyclinD1,PPARd-fibronectinandmatrilysin(anextracellularmetalloproteinase)CNSMutationclusterregion-allresultinproteintruncationRacGEFGraybars-b-cateninbindingsites.APCmayplayaroleincell-celladhesion(Cadherins)Redbars-Axin/Conductinbindingsites(lostinmutations)Redarrows-nuclearexportsignals.MutantAPCaccumulatesinthenucleusAsefbindingactivatesRacatmembranes,inducingmembraneruffling thereforepossiblyaffectingcellmotilityMT-microtubulebindingsite.APCisinvolvedinlinkingmicrotubulestokinetochores thereforemutationscancontributetogenomicinstabilityb-catenindestructioncomplexAxinandAPCphysicallyinteract.APCmutationsincolonCAlackAxin bindingsites.-b-cateninbindstoAPC.APC/AxincomplexregulatesGSK3bkinaseactivity.BindstoAxin. ThereforeAxinmayserveascaffoldingfunction.AxinandAPCarealsoGSK3bsubstrates,andphosphorylationincreases theirabilitytobindb-catenin.HowwntsignalsinhibitGSK3bactivityisunclear.Dishevellediscritical.WntsignalresultsindephosphorylationofAxinPP2AdephosphorylatesAxin.ItscatalyticsubunitbindsAxinwhileits regulatorysubunitbindsAPC.TheregulatorysubunitofPP2A ismutatedinasubsetofcolonCA.HowisPP2Aactivityregulated?-Whereistheintracellularlocalizationofthedestructioncomplex?APCmutationWildtypeAPCAPCmutationsresultinincreasedgenomicinstabilityMouseModel-APCminMultipleintestinalneoplasia(min).APCgenemutation.Truncatedproteinat codon850.Htzhaveincreasedpropensityfortumors.Tumorsacquiresomaticmutation inwildtypeAPCallele.TumorslocatedinupperGItract(notcolorectal).Geneticbackgroundofmouseinfluencestumorload(?modifiers). MOM-1-possiblysecretedphospholipaseA2.APC1638TlacksC-terminaldomainthatbindstubulin,EB1-likeproteins. homozygousEScellshavehighdegreeofchromosomalinstability buthomozygousmicedoNOTexhibitincreasedtumorsusceptibilityCooperatingOncogenes.Cyclooxygenase2:deletionofCOX-2genesuppressesintestinalpolyposis inAPCD716mice.COX-2levelsareincreasedinpremalignantpolyps. ButCOX-2isexpressedininterstitialcellsnotintestinalepithelium.Smad4:deletionofSmad4inAPCD716miceresultedinmoreaggressive tumors(compoundhtzmice). HighlightstheroleofTGFsignalintumorprogression.DNAmethyltransferase:compoundhtzhavereducedpolypnumbers (epigeneticevents?).TumourProgressionTGF
signalingmutationsreceptorIImutationsdetectedinregionsofhighgradedysplasia butabsentinadenomas.Intumourswithmicrosatelliteinstability(MI)mutationscorrelatewithprogressionofadenomastocancermutationsinTGFsignalingcomponents(e.g.,smad4)-nonMItumor accelerate/worsenmurine(APCmin)intestinalcancermodelCell-celladhesivecomplexmutations-cadherins,b-catenins,others?3.Metalloproteinaseactivation-matrilysinisatcf-responsivegenecompactionoftheearlyembryo-morphogeneticmovementofcells-establishmentofcellfates,andpolaritylossofcell-cellandcell-matrixrecognitiontissueinvasionmotilitynormaldevelopmentcancerprogression“epithelialmesenchymal”transitionHedgehogSignalingPathwayGenesTargets04CubitusInterruptusTransducers-effectors03PatchedReceptor02HedgehogSignal01单击此处可添加副标题单击此处添加大标题内容•MutationsinHedgehogsignalinginhumansembryosyieldscyclopia(aformofholoprosencephaly)imagesareonlyforthestout-hearted.•Inadults,mutationsinHedgehogsignalinggivesphenotypesinstemcellandprogenitorpopulations.Increasedsignalinggivestumors,lesssignalinggivesshort-livedstemcells•MostrecentadvanceisthatmanytumorsshowelevatedHhsignaling.Cyclopamine(firstobtainedfromthecornlily)haspromisefortherapeuticinterventionofcancer.TheSignal:Hedgehog•Lipidmodifiedwithcholesterol•Sticktoextracellularmatrix•Secretedproteinligand-heavilyprocessed•Shortrangeacting•Gradients---->morphogenic?•threeligandsinmammals:Indian,Desert,Sonic010203040506Thehedgehoggeneencodesanovelmembrane-linkedligandimportantforlocalpatterningofmanytissues.Theprimarytranslationproductcontainsasignalpeptidethatiscleavedtoproducea45kDapolypeptideprecursor.Cleavageofthissecretedprecursorproducesa20kDaN-terminalfragmentassociatedwiththeplasmamembraneandwithinductiveactivityplusa25kDafragment.TheN-terminalfragmentbecomestetheredtothemembraneviaahydrophobiccholesterolmoiety(itdoesn’tcontainanyhydro
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